Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917902.1_cds_XP_016467444.1_60191
CDS Infomation

[gene=LOC107790059] [db_xref=GeneID:107790059] [protein=golgin candidate 3-like isoform X4] [protein_id=XP_016467444.1] [location=join(73501..73605,73972..74110,74194..74258,74977..75144,75340..75417,75543..75689,76830..77126,77287..77352,81701..81903,82621..82675,83072..83248,83938..84276)] [gbkey=CDS]
Sequence

ATGTCCATTATCATGGAGAGGAAGGACTCATTGCTTTGCACAACAGTCGAGTTGTGCTGT
TGTATTGTGACAAAACATGCCTCATACTGTAGAGAGTTGCTAAAGGAGCTTGCAGACTTG
CTTGAAGAGAAAAATAAATCCCTGTCAGCCATGCAGGCATCTCATGAGTTGCAGTTAAAA
AAACTGGAAATGGAGCTTAATAAAGAACGGACCGAGCTGGCAAATATGCAAACTAGGTTA
CAAGAGGAGCAGAAGCTGAGCTCGACTTTCCAACAAGAGCTGAACTCTTTAAAAGTAGAC
AAGGATAAAATGGCTGTGGAGATGACAAATATTCGTGCTGAGCTATCTCATAAAGTATCT
GAATTAAAACAGTTGCAAATGGAGCTTCATGAAAGAGATAACGATGAATCAAATGAAGCA
ATAGACGGTTTGAGAAGAGTTATAGAAACACTGCAGAAAGAGAACAGTCATCTTAAGAAT
GAGAAAGATAAATTAGAAGCTTCAGCAGCTGGTGCTTCTTCAGCTGATAGAAGTAACATC
AATGGTTTAACTGAGAAGGTGCATCCTTTGGAGGTATTTCCTGAAAAGGAAGAAATGAAG
AGGTCGTTGCAAAATTTGGAGAATGAATTGAAGGAAACACGCCGGGAAAGGGACAAAGCA
CTGCAAGAACTGAAACGTCTTAAGCAGCATTTACTTGAGAAGGAAATGGAAGAATCAGAA
AAGATGGATGAAGACAGCCAGATAATTGAAGAACTACGTCAAAATATCGAATATCAACGA
GCTCAAATACTGCAGTTGGAAAAAGCTATTAAGCAAGCAATTGCAAGTCAAGAAGATGTC
AAAACCCTTAATGATAATGAATTAAAGAAGTCGAAGGATACAGTCAACGAGCTAAATAAA
AAACTAGCCAACTGTTTGAGCACAATAGAAGCCCAAAATGTTGAAGTCCTTAACCTACAA
ACTGCACTTGGCCAATACTATGCCGAGATTGAAGCCAAGGAACGCGTTGGAGAAGAATTG
GTAGCGGCAAAGGAGGAATCACATAAACTTTCAGGGCTTTTGAAGGATGCTTACAATGAG
TCAGAAACATTCAAGAAGGAGAAAGAAGAGATGTTGGTGAAGTTTTCAGACATGGAGAGA
AGACTTTCTGAAGGGAAGGGCCGTATAAATAAGCTTGAGCAAGACAATGAAAAGCTACGA
CGAGCTCTTGAACAGAGCATGACCAGGCTGAATAGGATGTCACTGGATTCTGATAATTAT
GTTGACAGGCGGATTGTGATCAAGTTACTGGTGACTTACTTCCAAAGGAATCACAGCAAA
GAGGTTTTGGATCTTATGGTCCGTATGTTAGGATTCTCTGATGAAGATAAGCAGAGGATA
GGCATGGCTCAACAAGGATCTGGTAAAGGTGTCGTCCGGGGTGTCTTGGGTCTCCCTGGA
CGACTAGTAGGTGGCATCTTGGGTGGAAGTTCAGCACCTTCTAGTACGGCATCTGATCAG
TCCTTTGCAGATCTCTGGGTTGATTTTCTTCTTAAAGAGACAGAAAGAGAGAAGAGGGAG
GCTGCTGAAGCTGGCAACGGAAATGCAGGAGATCAAATCAAGGGATTTCAGGAGGCAATG
GGTGCAGATGGAACCATGGCAGAACATAGGTCAAATAGTTCTGATGTTACCTTTATTTCC
CCGAGACAACAATCTTCTCCTAAGCATAACCTACCCCCTTTGGCACCACATTCACGGCAA
GTTATCTTGCCCCCTGAGCATTCCGATGCCGAGTTCTCAACAGTACCGCTTACCCCATTG
GAAACCAATTATCAGATTTCAAGACTACCTAGATACTGA

Peptide Sequence

PEP ID

XP_016467444.1
PEP Infomation

PREDICTED: golgin candidate 3-like isoform X4 [Nicotiana tabacum]
Sequence

MSIIMERKDSLLCTTVELCCCIVTKHASYCRELLKELADLLEEKNKSLSAMQASHELQLK
KLEMELNKERTELANMQTRLQEEQKLSSTFQQELNSLKVDKDKMAVEMTNIRAELSHKVS
ELKQLQMELHERDNDESNEAIDGLRRVIETLQKENSHLKNEKDKLEASAAGASSADRSNI
NGLTEKVHPLEVFPEKEEMKRSLQNLENELKETRRERDKALQELKRLKQHLLEKEMEESE
KMDEDSQIIEELRQNIEYQRAQILQLEKAIKQAIASQEDVKTLNDNELKKSKDTVNELNK
KLANCLSTIEAQNVEVLNLQTALGQYYAEIEAKERVGEELVAAKEESHKLSGLLKDAYNE
SETFKKEKEEMLVKFSDMERRLSEGKGRINKLEQDNEKLRRALEQSMTRLNRMSLDSDNY
VDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSDEDKQRIGMAQQGSGKGVVRGVLGLPG
RLVGGILGGSSAPSSTASDQSFADLWVDFLLKETEREKREAAEAGNGNAGDQIKGFQEAM
GADGTMAEHRSNSSDVTFISPRQQSSPKHNLPPLAPHSRQVILPPEHSDAEFSTVPLTPL
ETNYQISRLPRY

Transcript Sequence

Gene sequence data has not been registered.